SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900349
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr22:21623821-21630422
Size: 6601
Super-enhancer rank 349
Number of SE elements: 1
ChIP density(Case|Control): 35579.39|4549.4092
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: YDJC ;
ROSE Overlap YDJC ; UBE2L3 ;
ROSE Proximal PPIL2 ; MIR301B ; MIR130B ; CCDC116 ; SDF2L1 ;
ROSE Closest YDJC ;
Lasso ;
PreSTIGE CCDC116 ; PPIL2 ; SDF2L1 ; UBE2L3 ; YDJC ;
ABC ;
BETA UBE2L3 ; PPIL2 ; CCDC116 ; MIR301B ; RIMBP3B ; MIR130B ; RIMBP3C ; SDF2L1 ; YDJC ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900349 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers