SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900347
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr16:30063277-30079948
Size: 16671
Super-enhancer rank 347
Number of SE elements: 4
ChIP density(Case|Control): 32861.8752|1778.7957
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP4C;
ROSE Overlap ALDOA; PPP4C;
ROSE Proximal YPEL3; C16orf92; TBX6; MAPK3; LOC100271831; FAM57B; GDPD3;
ROSE Closest PPP4C;
Lasso ALDOA; FA57B; GDPD3; HIRIP3; INO80E; APK3; AZ; TAOK2; YPEL3;
PreSTIGE ALDOA; HIRIP3;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900347 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers