SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900346
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr8:67054654-67066624
Size: 11970
Super-enhancer rank 346
Number of SE elements: 2
ChIP density(Case|Control): 32763.087|1582.434
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: COPS5 ;
ROSE Overlap CSPP1 ; COPS5 ;
ROSE Proximal LRRC67 ;
ROSE Closest COPS5 ;
Lasso C8orf44 ; COPS5 ; CSPP1 ; PPP1R42 ; VCPIP1 ;
PreSTIGE COPS5 ; CSPP1 ; SNHG6 ;
ABC ;
BETA CSPP1 ; COPS5 ; TCF24 ; PPP1R42 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900346 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers