SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900341
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr12:57537755-57554527
Size: 16772
Super-enhancer rank 341
Number of SE elements: 2
ChIP density(Case|Control): 33956.5912|2544.3124
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DCTN2 ;
ROSE Overlap KIF5A ; DCTN2 ;
ROSE Proximal MBD6 ; MARS ; DDIT3 ; PIP4K2C ;
ROSE Closest DCTN2 ;
Lasso ;
PreSTIGE ARHGAP9 ; ARHGEF25 ; B4GALNT1 ; DCTN2 ; DDIT3 ; INHBE ; KIF5A ; ARS ; SLC26A10 ;
ABC ;
BETA ARHGAP9 ; DDIT3 ; ARHGEF25 ; LOC101927583 ; B4GALNT1 ; MBD6 ; SLC26A10 ; DCTN2 ; PIP4K2C ; DTX3 ; KIF5A ; MARS ; GLI1 ; INHBE ; MIR616 ; MIR6758 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900341 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers