SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900340
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr17:79802194-79837319
Size: 35125
Super-enhancer rank 340
Number of SE elements: 8
ChIP density(Case|Control): 36129.575|4692.7
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CBX4 ;
ROSE Overlap CBX4 ;
ROSE Proximal CBX2 ; CBX8 ;
ROSE Closest CBX4 ;
Lasso CBX2 ; CBX4 ; CBX8 ;
PreSTIGE ;
ABC P4HB ; ARHGDIA ; LRRC45 ; DUS1L ; ARL16 ; HGS ; MRPL12 ; SLC25A10 ; MCRIP1 ; PPP1R27 ; PYCR1 ; MAFG-AS1 ; MAFG ; MYADML2 ; CENPX ; SIRT7 ; PCYT2 ; NPB ; ALYREF ; ANAPC11 ;
BETA ENPP7 ; CBX2 ; CBX4 ; LOC101928738 ; CBX8 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900340 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers