SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900331
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr2:85537064-85540923
Size: 3859
Super-enhancer rank 331
Number of SE elements: 1
ChIP density(Case|Control): 32429.8783|630.5606
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MAT2A ;
ROSE Overlap MAT2A ;
ROSE Proximal VAMP8 ; VAMP5 ; GGCX ;
ROSE Closest MAT2A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA VAMP5 ; USP39 ; TMEM150A ; MAT2A ; RNF181 ; VAMP8 ; LOC100630918 ; C2orf68 ; GGCX ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900331 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers