SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900316
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:28246324-28279579
Size: 33255
Super-enhancer rank 316
Number of SE elements: 4
ChIP density(Case|Control): 36823.2615|4552.6095
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SESN2 ;
ROSE Overlap SESN2 ;
ROSE Proximal MED18 ; ATPIF1 ; DNAJC8 ;
ROSE Closest SESN2 ;
Lasso ED18 ; PHACTR4 ; SESN2 ;
PreSTIGE ATPIF1 ; DNAJC8 ; ED18 ; SESN2 ;
ABC ;
BETA ATPIF1 ; DNAJC8 ; MED18 ; SESN2 ; PTAFR ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900316 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers