SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900307
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:50967169-50979659
Size: 12490
Super-enhancer rank 307
Number of SE elements: 3
ChIP density(Case|Control): 35341.704|2622.9
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CDKN2C ;
ROSE Overlap CDKN2C ;
ROSE Proximal FAF1 ;
ROSE Closest CDKN2C ;
Lasso ;
PreSTIGE CDKN2C ; FAF1 ;
ABC ;
BETA MIR6500 ; CDKN2C ; FAF1 ; MIR4421 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900307 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers