SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900283
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:50356998-50379237
Size: 22239
Super-enhancer rank 283
Number of SE elements: 9
ChIP density(Case|Control): 36587.6028|3013.3845
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NAPSA ;
ROSE Overlap NAPSA ; NR1H2 ;
ROSE Proximal SPIB ; NAPSB ; POLD1 ; KCNC3 ;
ROSE Closest NAPSA ;
Lasso ;
PreSTIGE KCNC3 ; NAPSA ; NR1H2 ; POLD1 ;
ABC PNKP ; PTOV1-AS2 ;
BETA KCNC3 ; NR1H2 ; SPIB ; POLD1 ; NAPSB ; MYBPC2 ; NAPSA ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900283 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers