SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900276
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:12777801-12802179
Size: 24378
Super-enhancer rank 276
Number of SE elements: 6
ChIP density(Case|Control): 36837.5958|2801.0322
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: JUNB ;
ROSE Overlap PRDX2 ; JUNB ;
ROSE Proximal ASNA1 ; HOOK2 ; RNASEH2A ; RTBDN ; C19orf43 ; MAST1 ; BEST2 ;
ROSE Closest JUNB ;
Lasso ASNA1 ; DHPS ; GADD45GIP1 ; AST1 ; RTBDN ; TNPO2 ; WDR83OS ;
PreSTIGE ;
ABC MAN2B1 ; WDR83 ; WDR83OS ; DHPS ;
BETA RTBDN ; RNASEH2A ; MIR6794 ; TNPO2 ; C19orf43 ; FBXW9 ; PRDX2 ; MIR5684 ; HOOK2 ; MAST1 ; SNORD41 ; DNASE2 ; JUNB ; BEST2 ; KLF1 ; ASNA1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900276 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers