SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900270
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr5:95705945-95732885
Size: 26940
Super-enhancer rank 270
Number of SE elements: 6
ChIP density(Case|Control): 38890.584|4488.204
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RHOBTB3 ;
ROSE Overlap RHOBTB3 ;
ROSE Proximal SPATA9 ;
ROSE Closest RHOBTB3 ;
Lasso RFESD ; RHOBTB3 ; SPATA9 ;
PreSTIGE RFESD ; RHOBTB3 ; SPATA9 ;
ABC ;
BETA RFESD ; RHOBTB3 ; SPATA9 ; GPR150 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900270 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers