SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900268
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr12:6604486-6640894
Size: 36408
Super-enhancer rank 268
Number of SE elements: 6
ChIP density(Case|Control): 37216.2576|2632.2984
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LPAR5 ;
ROSE Overlap LPAR5 ; ACRBP ; CHD4 ;
ROSE Proximal IFFO1 ; ZNF384 ; NOP2 ; SCARNA11 ; ING4 ;
ROSE Closest LPAR5 ;
Lasso ACRBP ; CHD4 ; COPS7A ; GAPDH ; ING4 ; LPAR5 ; LRRC23 ; LF2 ; NCAPD2 ; NOP2 ; TPI1 ; ZNF384 ;
PreSTIGE ACRBP ; LPAR5 ;
ABC ;
BETA IFFO1 ; LPAR5 ; GAPDH ; NOP2 ; ZNF384 ; SCARNA11 ; CHD4 ; ACRBP ; ING4 ; PIANP ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900268 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers