SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900267
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:40741372-40755137
Size: 13765
Super-enhancer rank 267
Number of SE elements: 2
ChIP density(Case|Control): 36111.101|1470.102
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C19ORF54 ;
ROSE Overlap C19orf54 ; SNRPA ;
ROSE Proximal ADCK4 ; MIA ; EGLN2 ; RAB4B ; ITPKC ;
ROSE Closest C19orf54 ;
Lasso ADCK4 ; C19orf54 ; ITPKC ; NUBL ; RAB4B ; RAB4B-EGLN2 ; SHKBP1 ; SNRPA ;
PreSTIGE C19orf54 ; EGLN2 ; RAB4B ; SNRPA ;
ABC ;
BETA RAB4B ; ITPKC ; NUMBL ; SNRPA ; C19orf54 ; RAB4B-EGLN2 ; EGLN2 ; MIA ; ADCK4 ; MIA-RAB4B ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900267 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers