SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900261
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:30715711-30722321
Size: 6610
Super-enhancer rank 261
Number of SE elements: 1
ChIP density(Case|Control): 36433.659|1608.213
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MDC1 ;
ROSE Overlap MDC1 ; TUBB ;
ROSE Proximal NRM ; KIAA1949 ; IER3 ; DHX16 ; FLOT1 ;
ROSE Closest MDC1 ;
Lasso ABCF1 ; C6orf136 ; DDR1 ; DHX16 ; HLA-E ; PPP1R10 ; PRRC2A ;
PreSTIGE ;
ABC ;
BETA NRM ; PPP1R18 ; ATAT1 ; C6orf136 ; TUBB ; FLOT1 ; MDC1 ; DHX16 ; IER3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900261 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers