SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900254
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:10285211-10306108
Size: 20897
Super-enhancer rank 254
Number of SE elements: 4
ChIP density(Case|Control): 38151.6529|2493.0121
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ICAM5 ;
ROSE Overlap ICAM1 ; ICAM4 ; ICAM5 ; ZGLP1 ;
ROSE Proximal ICAM4 ; FDX1L ; ICAM3 ; RAVER1 ; MRPL4 ;
ROSE Closest ICAM5 ;
Lasso ;
PreSTIGE FDX1L ; ICA1 ; ICA3 ; ICA4 ; ICA5 ; RPL4 ; TYK2 ; ZGLP1 ;
ABC DNMT1 ;
BETA MRPL4 ; ICAM5 ; MIR4322 ; ZGLP1 ; ICAM4 ; TYK2 ; ICAM3 ; S1PR2 ; RAVER1 ; ICAM1 ; FDX1L ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900254 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers