SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900251
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr5:138573194-138576743
Size: 3549
Super-enhancer rank 251
Number of SE elements: 1
ChIP density(Case|Control): 36710.1462|681.7629
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HSPA9 ;
ROSE Overlap HSPA9 ;
ROSE Proximal ETF1 ; SNORD63 ;
ROSE Closest HSPA9 ;
Lasso EGR1 ; ATR3 ; REEP2 ; SIL1 ;
PreSTIGE ;
ABC ;
BETA ETF1 ; HSPA9 ; SNORD63 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900251 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers