SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900236
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr11:64205443-64209686
Size: 4243
Super-enhancer rank 236
Number of SE elements: 1
ChIP density(Case|Control): 37457.204|723.8558
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FERMT3 ;
ROSE Overlap FERMT3 ;
ROSE Proximal MACROD1 ; STIP1 ; FKBP2 ; NUDT22 ; DNAJC4 ; VEGFB ; PLCB3 ; TRPT1 ; PPP1R14B ;
ROSE Closest FERMT3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TRPT1 ; NUDT22 ; ESRRA ; GPR137 ; BAD ; VEGFB ; KCNK4 ; STIP1 ; FERMT3 ; FKBP2 ; DNAJC4 ; MACROD1 ; PLCB3 ; PPP1R14B ; TEX40 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900236 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers