SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900228
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr2:43168619-43196159
Size: 27540
Super-enhancer rank 228
Number of SE elements: 12
ChIP density(Case|Control): 41042.862|3739.932
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZFP36L2 ;
ROSE Overlap ;
ROSE Proximal LOC100129726 ; ZFP36L2 ;
ROSE Closest ZFP36L2 ;
Lasso ;
PreSTIGE ;
ABC LINC01126 ; ZFP36L2 ; LINC01819 ; PLEKHH2 ; MTA3 ; PKDCC ; THADA ;
BETA ZFP36L2 ; LINC01126 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900228 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers