SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900226
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr5:132277764-132319181
Size: 41417
Super-enhancer rank 226
Number of SE elements: 9
ChIP density(Case|Control): 43856.4613|6100.7241
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC22A4 ;
ROSE Overlap SLC22A4 ;
ROSE Proximal P4HA2 ; PDLIM4 ; MIR3936 ;
ROSE Closest SLC22A4 ;
Lasso ;
PreSTIGE LOC553103 ; SLC22A4 ; SLC22A5 ;
ABC ZCCHC10 ; HSPA4 ; AFF4 ;
BETA P4HA2 ; SLC22A5 ; MIR3936 ; SLC22A4 ; PDLIM4 ; MIR6830 ; LOC553103 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900226 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers