SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900225
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr12:31714270-31751415
Size: 37145
Super-enhancer rank 225
Number of SE elements: 13
ChIP density(Case|Control): 42557.0265|4732.273
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: AMN1 ;
ROSE Overlap AMN1 ;
ROSE Proximal AMN1 ; H3F3C ;
ROSE Closest AMN1 ;
Lasso AN1 ; BICD1 ; KIAA1551 ;
PreSTIGE AN1 ; C12orf35 ; H3F3C ;
ABC DENND5B ; DENND5B-AS1 ;
BETA AMN1 ; METTL20 ; H3F3C ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900225 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers