SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900213
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:151051179-151065229
Size: 14050
Super-enhancer rank 213
Number of SE elements: 4
ChIP density(Case|Control): 41312.62|2770.66
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CDC42SE1 ;
ROSE Overlap C1orf56 ; MLLT11 ; CDC42SE1 ;
ROSE Proximal BNIPL ; FAM63A ; GABPB2 ; PRUNE ; CDC42SE1 ;
ROSE Closest CDC42SE1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA FAM63A ; PRUNE ; CERS2 ; C1orf56 ; SEMA6C ; TNFAIP8L2-SCNM1 ; MLLT11 ; CDC42SE1 ; BNIPL ; GABPB2 ; TNFAIP8L2 ; ANXA9 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900213 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers