SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900212
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:225995735-226004222
Size: 8487
Super-enhancer rank 212
Number of SE elements: 3
ChIP density(Case|Control): 40785.1272|2187.0999
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C1ORF55 ;
ROSE Overlap C1orf55 ;
ROSE Proximal ;
ROSE Closest C1orf55 ;
Lasso ;
PreSTIGE C1orf55 ; H3F3A ; PYCR2 ;
ABC EPHX1 ;
BETA SDE2 ; H3F3A ; H3F3AP4 ; PYCR2 ; LEFTY2 ; MIR6741 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900212 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers