SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900205
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:4369041-4383186
Size: 14145
Super-enhancer rank 205
Number of SE elements: 5
ChIP density(Case|Control): 41033.2305|1799.244
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SH3GL1 ;
ROSE Overlap SH3GL1 ;
ROSE Proximal MPND ; CHAF1A ; STAP2 ;
ROSE Closest SH3GL1 ;
Lasso ;
PreSTIGE ;
ABC CHAF1A ; SH3GL1 ; SHD ; FSD1 ; STAP2 ; MPND ; HDGFRP2 ; CCDC94 ; UBXN6 ; EBI3 ;
BETA STAP2 ; FSD1 ; TMIGD2 ; SH3GL1 ; UBXN6 ; MPND ; MIR4746 ; CHAF1A ; SHD ; HDGFRP2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900205 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers