SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900204
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr3:196336200-196341639
Size: 5439
Super-enhancer rank 204
Number of SE elements: 2
ChIP density(Case|Control): 40312.7802|1052.4465
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TM4SF19 ;
ROSE Overlap TM4SF19 ;
ROSE Proximal PCYT1A ; TCTEX1D2 ;
ROSE Closest TM4SF19 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TM4SF19-TCTEX1D2 ; TM4SF19 ; PCYT1A ; TCTEX1D2 ; TM4SF19-AS1 ; UBXN7 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900204 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers