SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900198
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:2987057-3004545
Size: 17488
Super-enhancer rank 198
Number of SE elements: 5
ChIP density(Case|Control): 43510.144|3780.9056
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NQO2 ;
ROSE Overlap NQO2 ; DKFZP686I15217 ;
ROSE Proximal DKFZP686I15217 ; FAM136B ; LOC401233 ; SERPINB6 ;
ROSE Closest NQO2 ;
Lasso NQO2 ; RIPK1 ;
PreSTIGE DKFZP686I15217 ; HTATSF1P2 ; NQO2 ; SERPINB6 ; SERPINB9 ;
ABC SERPINB6 ; LINC01011 ; RIPK1 ; BPHL ; LOC101927759 ; PSMG4 ; HTATSF1P2 ; NQO2 ; SERPINB9 ; LOC101927730 ; SERPINB9P1 ; SERPINB1 ; WRNIP1 ; MYLK4 ; LINC01600 ;
BETA SERPINB6 ; NQO2 ; RIPK1 ; HTATSF1P2 ; LINC01011 ; SERPINB9 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900198 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers