SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900197
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr3:49688052-49692093
Size: 4041
Super-enhancer rank 197
Number of SE elements: 1
ChIP density(Case|Control): 43168.7907|3318.0651
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNF123 ;
ROSE Overlap RNF123 ; MST1 ;
ROSE Proximal GMPPB ; AMIGO3 ; APEH ;
ROSE Closest RNF123 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA IP6K1 ; MST1 ; AMIGO3 ; GMPPB ; RNF123 ; APEH ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900197 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers