SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900190
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:46782211-46789364
Size: 7153
Super-enhancer rank 190
Number of SE elements: 1
ChIP density(Case|Control): 41181.9669|1015.0107
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC1A5 ;
ROSE Overlap SLC1A5 ;
ROSE Proximal FKRP ; STRN4 ; SNAR-E ;
ROSE Closest SLC1A5 ;
Lasso AP2S1 ; ARHGAP35 ; BBC3 ; FKRP ; NPAS1 ; PRKD2 ; SAE1 ; STRN4 ; TE160 ; ZC3H4 ;
PreSTIGE ;
ABC ;
BETA PRKD2 ; SLC1A5 ; SNAR-E ; AP2S1 ; MIR320E ; STRN4 ; FKRP ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900190 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers