SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900177
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:38635689-38689721
Size: 54032
Super-enhancer rank 177
Number of SE elements: 12
ChIP density(Case|Control): 48304.608|6543.2752
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ACTN4 ;
ROSE Overlap ACTN4 ; EIF3K ;
ROSE Proximal MAP4K1 ;
ROSE Closest ACTN4 ;
Lasso ECH1 ; EIF3K ; AP4K1 ;
PreSTIGE ;
ABC ;
BETA MAP4K1 ; ACTN4 ; CAPN12 ; EIF3K ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900177 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers