SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900176
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chrX:48935986-48962883
Size: 26897
Super-enhancer rank 176
Number of SE elements: 7
ChIP density(Case|Control): 45011.5267|3100.0711
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: OTUD5 ;
ROSE Overlap KCND1 ; OTUD5 ;
ROSE Proximal PQBP1 ; GRIPAP1 ; SLC35A2 ; TIMM17B ; PIM2 ;
ROSE Closest OTUD5 ;
Lasso CCDC120 ; GRIPAP1 ; KCND1 ; PI2 ; PQBP1 ; SLC35A2 ; TFE3 ; TI17B ;
PreSTIGE KCND1 ; OTUD5 ; PI2 ; SLC35A2 ; TI17B ;
ABC WDR45 ;
BETA SLC35A2 ; OTUD5 ; TFE3 ; PQBP1 ; PIM2 ; GRIPAP1 ; KCND1 ; TIMM17B ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900176 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers