SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900172
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr18:3444561-3453542
Size: 8981
Super-enhancer rank 172
Number of SE elements: 2
ChIP density(Case|Control): 44783.7565|1753.0912
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TGIF1 ;
ROSE Overlap TGIF1 ;
ROSE Proximal TGIF1 ;
ROSE Closest TGIF1 ;
Lasso ;
PreSTIGE ;
ABC DLGAP1-AS2 ; NDC80 ; CBX3P2 ; LINC00526 ; LINC00667 ; ZBTB14 ; DLGAP1-AS1 ; SMCHD1 ; EMILIN2 ; LOC727896 ; LPIN2 ; MYOM1 ; GAPLINC ; MYL12A ; LOC104968399 ; MYL12B ; TGIF1 ; METTL4 ;
BETA TGIF1 ; GAPLINC ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900172 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers