SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900155
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr12:54278745-54283979
Size: 5234
Super-enhancer rank 155
Number of SE elements: 1
ChIP density(Case|Control): 46457.5074|1135.778
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HNRNPA1P10 ;
ROSE Overlap HNRNPA1P10 ; HNRNPA1 ; CBX5 ;
ROSE Proximal CBX5 ; NFE2 ; COPZ1 ;
ROSE Closest HNRNPA1P10 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CBX5 ; SMUG1 ; COPZ1 ; NFE2 ; LOC102724050 ; HNRNPA1 ; MIR3198-2 ; MIR148B ; GPR84 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900155 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers