SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900146
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:21768433-21795039
Size: 26606
Super-enhancer rank 146
Number of SE elements: 6
ChIP density(Case|Control): 49191.8334|2953.266
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: USP48 ;
ROSE Overlap USP48 ;
ROSE Proximal LDLRAD2 ;
ROSE Closest USP48 ;
Lasso HSPG2 ; RAP1GAP ;
PreSTIGE USP48 ;
ABC NBPF3 ;
BETA USP48 ; LDLRAD2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900146 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers