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Super-enhancer overview

SE ID: SE_01_003900139
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:28500974-28522316
Size: 21342
Super-enhancer rank 139
Number of SE elements: 5
ChIP density(Case|Control): 50811.0336|3555.5772
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNHG3;
ROSE Overlap RCC1; SNHG3;
ROSE Proximal TRNAU1AP; SNHG3;
ROSE Closest RCC1;
Lasso PHACTR4; RCC1; SESN2; TAF12;
PreSTIGE RCC1; SNHG12; SNHG3; SNORA16A; SNORA44;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900139 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers