SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900125
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:25407277-25430828
Size: 23551
Super-enhancer rank 125
Number of SE elements: 6
ChIP density(Case|Control): 55726.3762|6502.4311
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RHCE ;
ROSE Overlap RHCE ;
ROSE Proximal TMEM57 ; RHCE ;
ROSE Closest RHCE ;
Lasso AL020996.1 ; AUNIP ; C1orf63 ; RHCE ; SYF2 ; TE50A ; TE57 ;
PreSTIGE C1orf63 ; RHCE ; RHD ;
ABC ;
BETA RHCE ; TMEM57 ; TMEM50A ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900125 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers