SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900119
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr10:5447487-5488101
Size: 40614
Super-enhancer rank 119
Number of SE elements: 10
ChIP density(Case|Control): 56355.9864|5661.5916
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NET1 ;
ROSE Overlap NET1 ;
ROSE Proximal TUBAL3 ; CALML5 ; CALML3 ;
ROSE Closest NET1 ;
Lasso NET1 ; TUBAL3 ;
PreSTIGE NET1 ; TUBAL3 ;
ABC AKR1C8P ; TUBAL3 ; NET1 ;
BETA NET1 ; CALML5 ; TUBAL3 ; CALML3-AS1 ; CALML3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900119 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers