SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900108
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:48950047-48976651
Size: 26604
Super-enhancer rank 108
Number of SE elements: 5
ChIP density(Case|Control): 55131.4692|2748.1932
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FTL ;
ROSE Overlap BAX ; FTL ; GYS1 ;
ROSE Proximal GYS1 ; RUVBL2 ; CGB ; DHDH ; LHB ; NUCB1 ;
ROSE Closest FTL ;
Lasso ;
PreSTIGE DHDH ; FTL ; NUCB1 ; PLEKHA4 ; PPP1R15A ; RUVBL2 ; TULP2 ;
ABC CYTH2 ;
BETA PLEKHA4 ; LHB ; LOC101059948 ; DHDH ; BAX ; GYS1 ; RUVBL2 ; MIR6798 ; CGB5 ; CGB8 ; SNAR-G2 ; TULP2 ; PPP1R15A ; CGB2 ; NUCB1-AS1 ; SNAR-G1 ; CGB7 ; FTL ; NUCB1 ; CGB ; CGB1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900108 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers