SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900106
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr11:61831882-61871848
Size: 39966
Super-enhancer rank 106
Number of SE elements: 9
ChIP density(Case|Control): 57830.802|4703.9982
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FADS1 ;
ROSE Overlap FADS2 ;
ROSE Proximal MIR611 ; C11orf10 ; RAB3IL1 ; FADS1 ; MIR1908 ; FADS3 ; FEN1 ;
ROSE Closest FADS2 ;
Lasso BEST1 ; FADS2 ; FEN1 ; FTH1 ; RAB3IL1 ; TE258 ;
PreSTIGE C11orf10 ; C11orf9 ; FADS1 ; FADS3 ; FEN1 ; RAB3IL1 ;
ABC ;
BETA FADS1 ; TMEM258 ; MYRF ; RAB3IL1 ; MIR611 ; BEST1 ; FEN1 ; MIR6746 ; FADS2 ; DKFZP434K028 ; FADS3 ; MIR1908 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900106 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers