SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900099
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chrX:48770661-48803397
Size: 32736
Super-enhancer rank 99
Number of SE elements: 7
ChIP density(Case|Control): 57124.9785|3249.7911
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GATA1 ;
ROSE Overlap GLOD5 ; GATA1 ; HDAC6 ;
ROSE Proximal PCSK1N ; ERAS ;
ROSE Closest GATA1 ;
Lasso ERAS ; GATA1 ; GLOD5 ; HDAC6 ; PCSK1N ; PI2 ; PQBP1 ; SLC35A2 ; SUV39H1 ; TFE3 ; TI17B ; WAS ;
PreSTIGE GATA1 ; GLOD5 ; HDAC6 ; SUV39H1 ; TI17B ; WAS ;
ABC PIM2 ; SSX1 ; PQBP1 ; TIMM17B ; GRIPAP1 ; SLC35A2 ; TFE3 ; WDR45 ; KCND1 ; OTUD5 ; WAS ;
BETA SUV39H1 ; PCSK1N ; GATA1 ; GLOD5 ; HDAC6 ; ERAS ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900099 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers