SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900098
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr9:131269861-131279931
Size: 10070
Super-enhancer rank 98
Number of SE elements: 2
ChIP density(Case|Control): 59689.925|5674.445
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FAM78A ;
ROSE Overlap FAM78A ;
ROSE Proximal PPAPDC3 ;
ROSE Closest FAM78A ;
Lasso ;
PreSTIGE FA78A ;
ABC ;
BETA FAM78A ; PPAPDC3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900098 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers