SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900096
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr18:8994044-9023256
Size: 29212
Super-enhancer rank 96
Number of SE elements: 10
ChIP density(Case|Control): 60051.1084|5602.8616
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NDUFV2 ;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest NDUFV2 ;
Lasso NDUFV2 ;
PreSTIGE NDUFV2 ;
ABC GACAT2 ; LOC100192426 ; RAB12 ; NDUFV2 ; NDUFV2-AS1 ; ANKRD12 ; TWSG1 ; LINC01254 ; RALBP1 ;
BETA NDUFV2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900096 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers