SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900092
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chrX:154783489-154822776
Size: 39287
Super-enhancer rank 92
Number of SE elements: 10
ChIP density(Case|Control): 58942.2861|3484.7569
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MPP1 ;
ROSE Overlap MPP1 ;
ROSE Proximal SNORA36A ; GAB3 ; DKC1 ; SNORA56 ; LOC100132963 ;
ROSE Closest MPP1 ;
Lasso DKC1 ; GAB3 ; PP1 ; SI9 ;
PreSTIGE DKC1 ; GAB3 ; PP1 ; SNORA56 ;
ABC ;
BETA MIR1184-1 ; MIR1184-3 ; MPP1 ; H2AFB1 ; MIR1184-2 ; F8 ; SMIM9 ; MIR664B ; SNORA56 ; H2AFB3 ; DKC1 ; GAB3 ; F8A3 ; SNORA36A ; H2AFB2 ; F8A1 ; F8A2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900092 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers