SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900090
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:116497322-116509854
Size: 12532
Super-enhancer rank 90
Number of SE elements: 4
ChIP density(Case|Control): 58432.9564|2763.306
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CD58 ;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest CD58 ;
Lasso ;
PreSTIGE CD58 ;
ABC ;
BETA ATP1A1-AS1 ; LOC101929023 ; CD58 ; MIR548AC ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900090 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers