SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900088
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:25266224-25286151
Size: 19927
Super-enhancer rank 88
Number of SE elements: 5
ChIP density(Case|Control): 62082.5685|6004.0051
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RHD ;
ROSE Overlap RHD ;
ROSE Proximal RHD ; SYF2 ; C1orf63 ;
ROSE Closest RHD ;
Lasso C1orf63 ; RHCE ; RHD ; SYF2 ; TE50A ; TE57 ;
PreSTIGE C1orf63 ; RHCE ; RHD ;
ABC ;
BETA RHD ; RSRP1 ; SYF2 ; TMEM50A ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900088 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers