SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900080
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:45422792-45486476
Size: 63684
Super-enhancer rank 80
Number of SE elements: 9
ChIP density(Case|Control): 63817.7364|6158.2428
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FOSB ;
ROSE Overlap ERCC1 ; FOSB ; RTN2 ;
ROSE Proximal PPM1N ; FOSB ; ERCC1 ; PPP1R13L ; CD3EAP ; VASP ;
ROSE Closest FOSB ;
Lasso CD3EAP ; ERCC2 ; PP1N ; PPP1R13L ; RTN2 ; VASP ;
PreSTIGE ERCC2 ; KLC3 ; PP1N ; RTN2 ; VASP ;
ABC APOC2 ; APOC4-APOC2 ; APOC4 ; APOC1P1 ; CLPTM1 ;
BETA ERCC1 ; PPP1R13L ; MIR6088 ; VASP ; FOSB ; CD3EAP ; PPM1N ; RTN2 ; ERCC2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900080 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers