SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900075
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:18362879-18388861
Size: 25982
Super-enhancer rank 75
Number of SE elements: 8
ChIP density(Case|Control): 61595.5274|2418.9242
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GDF15 ;
ROSE Overlap GDF15 ; PGPEP1 ; MIR3189 ;
ROSE Proximal LSM4 ; LRRC25 ; ISYNA1 ; SSBP4 ;
ROSE Closest GDF15 ;
Lasso ;
PreSTIGE ;
ABC LOC729966 ;
BETA LSM4 ; LRRC25 ; MIR3189 ; GDF15 ; JUND ; ISYNA1 ; PGPEP1 ; SSBP4 ; MIR3188 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900075 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers