SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900050
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:43903856-43991265
Size: 87409
Super-enhancer rank 50
Number of SE elements: 19
ChIP density(Case|Control): 85512.2247|16668.8963
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C6ORF223 ;
ROSE Overlap LOC100132354 ;
ROSE Proximal C6orf223 ;
ROSE Closest C6orf223 ;
Lasso C6orf223 ; VEGFA ;
PreSTIGE ;
ABC C6orf223 ; LOC101929705 ; LINC01512 ;
BETA LOC101929705 ; LINC01512 ; C6orf223 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900050 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers