SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900047
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:248827992-248891687
Size: 63695
Super-enhancer rank 47
Number of SE elements: 13
ChIP density(Case|Control): 78905.366|8273.9805
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZNF692 ;
ROSE Overlap ZNF672 ; ZNF692 ;
ROSE Proximal PGBD2 ; SH3BP5L ; MIR3124 ;
ROSE Closest ZNF692 ;
Lasso PGBD2 ; SH3BP5L ; ZNF672 ; ZNF692 ;
PreSTIGE PGBD2 ; ZNF672 ; ZNF692 ;
ABC ;
BETA ZNF692 ; PGBD2 ; ZNF672 ; MIR3124 ; SH3BP5L ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900047 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers