SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900045
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:12427997-12512444
Size: 84447
Super-enhancer rank 45
Number of SE elements: 19
ChIP density(Case|Control): 90531.3403|18425.4626
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNORA59A ;
ROSE Overlap VPS13D ; SNORA59A ;
ROSE Proximal ;
ROSE Closest SNORA59A ;
Lasso DHRS3 ;
PreSTIGE ;
ABC DHRS3 ; NPPA ; C1orf167 ; AGTRAP ; MAD2L2 ; FBXO6 ; FBXO44 ; FBXO2 ; MFN2 ; MIIP ; NPPB ; KIAA2013 ; DISP3 ; UBIAD1 ; MTOR ; ANGPTL7 ; MTOR-AS1 ; TNFRSF8 ; TNFRSF1B ; VPS13D ; EXOSC10 ; LOC105376736 ; SRM ; C1orf158 ; AADACL4 ;
BETA SNORA59B ; SNORA59A ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900045 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers