SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900033
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr9:120865074-120879575
Size: 14501
Super-enhancer rank 33
Number of SE elements: 4
ChIP density(Case|Control): 85015.0127|5639.4389
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PHF19 ;
ROSE Overlap PHF19 ;
ROSE Proximal TRAF1 ; PSMD5 ; LOC253039 ;
ROSE Closest PHF19 ;
Lasso ;
PreSTIGE LOC100288842 ; LOC253039 ; PHF19 ; PSD5 ;
ABC ;
BETA PSMD5 ; PHF19 ; TRAF1 ; LOC100288842 ; PSMD5-AS1 ; FBXW2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900033 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers