SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900023
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr3:4975770-5024480
Size: 48710
Super-enhancer rank 23
Number of SE elements: 9
ChIP density(Case|Control): 96889.061|9532.547
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: BHLHE40 ;
ROSE Overlap BHLHE40 ;
ROSE Proximal ;
ROSE Closest BHLHE40 ;
Lasso BHLHE40 ;
PreSTIGE BHLHE40 ;
ABC BHLHE40 ; BHLHE40-AS1 ; ARL8B ; EGOT ;
BETA BHLHE40-AS1 ; BHLHE40 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900023 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers